Mekakucity Actors, Charlotte Recommendations
Both shows feature a group of individuals in their adolescence who posses strange abilities.
Both anime involve characters having super powers. They both have characters with troubled past. They are also both comedies.
The main characters(most of them) have special abilities having to do with their eyes such as turning invisible to specific people.
The main character also starts off simple fun but nothing special until the halfway point where he's upset over something bad happening to a person he was really close to. They're also a secret group of teenagers.
Both series have a bunch of teenagers with special power related to their eyes & work to control together to control their power & prevent anybody from misusing it.
Both have a group that has special abilities and then look for other ones with special abilities and then make them join.