 If you liked
Koukaku Kidoutai: Stand Alone Complex
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 ...then you might like
Pumpkin Scissors
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I could describe Pumpkin Scissors as a pre-cybernetic version of Ghost in the Shell. Both tell a story of a special team which investigates conspiracies and wrong-doings of the military and the goverment and add some social commentary to the mix. The compositions of the teams are also quite similar. Pumpkin Scissors has somewhat more relaxed and silly feeling (more comedy) to it than GitS, so it can serve as a lighter option to it.