Yuri Manga with Trans Characters
Manga
Yuri/Shoujo-Ai/Girl's Love/GL Manga with binary transgender, non-binary, and intersex characters. Some are headcanons- those are indicated by question marks.
Also, some of them feature a cis female/trans male relationship and shouldn't be labelled as GL.
Not on MAL (yet):
Josei ga Suki na Josei to Otoko datta Josei no Hanashi
Makoto (trans woman) (main)
Osananajimi Yuri (?)
College Girl (trans woman) (main)
Mukashi no Osanajimi, Otokonoko Janakatta Mitai
Yuuki (trans girl) (main)
Not considered GL, but GL-adjacent:
Otto wa Jitsu wa Josei Deshita
Wafuko (trans woman) (main)
Sayonara Chinchin Welcome Manman ~OL ni naritakute Seibetsu Tekigou Shujutsu shita~
Yoriko Kamikawa (trans woman) (protagonist)
Umareru Seibetsu wo Machigaeta!
Mafuyu Konishi (trans woman) (protagonist)
Seibetsu X
Asuka Miyazaki (x-gender) (protagonist)
Hourou Musuko
Shuuichi Nitori (trans girl) (protagonist)
Kyou kara Yonshimai
Kashiwa Manabe (trans woman) (main)
Densen Complex (Love Horizon)
Yuko Matsuno (trans woman) (main)
Kaoru-san no Kikyou (Senpai)
Shirafuji (trans woman) (main)
Devilman Lady
Asuka Lan (intersex girl) (main)
Kanojo ni Naru Hi: Another
Aya Kurokawa (male to female) (main)
Kanojo ni Naritai Kimi to Boku
Akira Yonezawa (trans girl) (main)
Girlfriend
Kaoru Shirasaki (trans woman) (main)
Shoujo Kakumei Utena
Utena Tenjou (genderqueer?) (protagonist)
Silkscreen
They (genderfluid or trans man) (main)
Also, some of them feature a cis female/trans male relationship and shouldn't be labelled as GL.
Not on MAL (yet):
Josei ga Suki na Josei to Otoko datta Josei no Hanashi
Makoto (trans woman) (main)
Osananajimi Yuri (?)
College Girl (trans woman) (main)
Mukashi no Osanajimi, Otokonoko Janakatta Mitai
Yuuki (trans girl) (main)
Not considered GL, but GL-adjacent:
Otto wa Jitsu wa Josei Deshita
Wafuko (trans woman) (main)
Sayonara Chinchin Welcome Manman ~OL ni naritakute Seibetsu Tekigou Shujutsu shita~
Yoriko Kamikawa (trans woman) (protagonist)
Umareru Seibetsu wo Machigaeta!
Mafuyu Konishi (trans woman) (protagonist)
Seibetsu X
Asuka Miyazaki (x-gender) (protagonist)
Hourou Musuko
Shuuichi Nitori (trans girl) (protagonist)
Kyou kara Yonshimai
Kashiwa Manabe (trans woman) (main)
Densen Complex (Love Horizon)
Yuko Matsuno (trans woman) (main)
Kaoru-san no Kikyou (Senpai)
Shirafuji (trans woman) (main)
Devilman Lady
Asuka Lan (intersex girl) (main)
Kanojo ni Naru Hi: Another
Aya Kurokawa (male to female) (main)
Kanojo ni Naritai Kimi to Boku
Akira Yonezawa (trans girl) (main)
Girlfriend
Kaoru Shirasaki (trans woman) (main)
Shoujo Kakumei Utena
Utena Tenjou (genderqueer?) (protagonist)
Silkscreen
They (genderfluid or trans man) (main)
Manga, 2 vol, 2006
Me:-
Author:8
Sou Tanaka (trans man) (supporting)
Kai (trans man) (supporting)
Kou (trans man) (supporting)
Haruki "Haru" (trans man) (supporting)
Ryuu (trans man) (supporting)
Miki (trans woman) (minor)
Kai (trans man) (supporting)
Kou (trans man) (supporting)
Haruki "Haru" (trans man) (supporting)
Ryuu (trans man) (supporting)
Miki (trans woman) (minor)
Manga, 5 vol, 2004
Me:-
Author:-
Hazumu Osaragi (trans girl, gender-bending) (protagonist)
Doujinshi, ? vol, 2019
Me:-
Author:-
Hero (trans woman, gender-bending) (protagonist)
Light Novel, 1 vol, 2007
Me:-
Author:-
(name removed for spoilers) (agender and intersex) (main)
Manga, ? vol, 2008
Me:-
Author:-
(name removed for spoilers) (agender and intersex) (main)
Manga, 1 vol, 2006
Me:-
Author:-
All characters who don't choose a gender (agender) (main and supporting)
All male characters (trans men) (main and supporting)
All male characters (trans men) (main and supporting)
Light Novel, 37 vol, 1998
Me:-
Author:-
Alice Arisugawa (trans girl) (supporting)
Manga, 1 vol, 2010
Me:-
Author:6
(Shounen/Boy)
Miyaji's mom (trans woman) (supporting)
Miyaji's mom (trans woman) (supporting)
Manga, 1 vol, 2006
Me:-
Author:6
(Kanojo no Yuuwaku/Her Temptation)
Yuno's brother (trans boy) (supporting)
Yuno's brother (trans boy) (supporting)
Manga, ? vol, 2020
Me:-
Author:-
Yuu Bauer (trans girl) (supporting)
Misaki Nakahara (trans man) (minor)
Misaki Nakahara (trans man) (minor)
Light Novel, ? vol, 2021
Me:-
Author:-
Yuu Bauer (trans girl) (supporting)
Misaki Nakahara (trans man) (minor)
Misaki Nakahara (trans man) (minor)
Doujinshi, ? vol, 2007
Me:-
Author:6
Cat Person 1 (gender ambiguous) (protagonist)
Cat Person 2 (gender ambiguous) (main)
Cat Person 2 (gender ambiguous) (main)
Manga, 1 vol, 1993
Me:-
Author:5
(Color Color)
Nacchan (trans boy?) (main)
(shouldn't be labelled as Girl's Love?)
Nacchan (trans boy?) (main)
(shouldn't be labelled as Girl's Love?)
One-shot, ? vol, 2011
Me:-
Author:6
Aoi (female to male, trans man?) (main)
(shouldn't be labelled as Girl's Love)
(shouldn't be labelled as Girl's Love)
Manga, 3 vol, 1986
Me:-
Author:-
Erminia (trans boy) (protagonist)
(should not be labelled as Girl's Love)
(should not be labelled as Girl's Love)